Publications
75
Engineering couplings for exciton transport using synthetic DNA scaffolds
Stephanie M. Hart, Wei-Jia Chen, James L. Banal, William P. Bricker, Amro Dodin, Larysa Markova, Yuliia Vyborna, Adam P. Willard, Robert Häner, Mark Bathe, Gabriela S. Schlau-Cohen
Chem (2020). doi: https://doi.org/10.1016/j.chempr.2020.12.020
74
Molecular diversity of glutamatergic and GABAergic synapses from multiplexed fluorescence imaging
Eric Danielson, Karen Perez de Arce, Beth Cimini, Eike-Christian Wamhoff, Shantanu Singh, Jeffrey R. Cottrell, Anne E. Carpenter, Mark Bathe
eNeuro (2020). doi: https://doi.org/10.1523/ENEURO.0286-20.2020
72
Opportunities, Barriers, and a Strategy for Overcoming Translational Challenges to Therapeutic Nucleic Acid Nanotechnology
Kirill A. Afonin, Marina A. Dobrovolskaia, George Church, Mark Bathe
ACS Nano (2020). https://doi.org/10.1021/acsnano.0c04753
71
Opportunities and challenges for the clinical translation of structured DNA assemblies as gene therapeutic delivery and vaccine vectors
Marina A. Dobrovolskaia, Mark Bathe
WIREs Nanomedicine And Nanobiotechnology (2020). https://doi.org/10.1002/wnan.1657
70
ROLE OF NANOSCALE ANTIGEN ORGANIZATION ON B-CELL ACTIVATION PROBED USING DNA ORIGAMI
Rémi Veneziano, Tyson J. Moyer, Matthew B. Stone, Sayak Mukherjee, Tyson R. Shepherd, Jayajit Das, William R. Schief, Darrell J. Irvine, Mark Bathe
Nature Nanotechnology (2020). https://doi.org/10.1038/s41565-020-0719-0
69
Molecular diversity of glutamatergic and GABAergic synapses from multiplexed fluorescence imaging
Eric Danielson, Karen Perez de Arce, Beth Cimini, Eike-Christian Wamhoff, Shantanu Singh, Jeffrey R. Cottrell, Anne E. Carpenter, Mark Bathe
bioRxiv (2020). https://doi.org/10.1101/2020.06.12.148155
68
Controlling wireframe DNA origami nuclease degradation with minor groove binders
Eike-Christian Wamhoff, Hellen Huang, Benjamin J. Read, Eric Ginsburg, William R. Schief, Nicholas Farrell, Darrell J. Irvine, Mark Bathe
bioRxiv (2020). https://doi.org/10.1101/2020.05.24.110783
67
IDENTIFICATION OF NON-RADIATIVE DECAY PATHWAYS IN CY3
Stephanie M. Hart, James L. Banal, Mark Bathe, and Gabriela S. Schlau-Cohen
J Phys Chem Lett (2020). https://doi.org/10.1021/acs.jpclett.0c01201
66
Rapid Prototyping of Wireframe Scaffolded DNA Origami using ATHENA
Hyungmin Jun, Xiao Wang, William Bricker, Steve Jackson, Mark Bathe
bioRxiv (2020). https://doi.org/10.1101/2020.02.09.940320
65
Arbitrary Boolean logical search operations on massive molecular file systems
James L. Banal, Tyson R. Shepherd, Joseph D. Berleant, Hellen Huang, Miguel Reyes, Cheri M. Ackerman, Paul Blainey, Mark Bathe
bioRxiv (2020). https://doi.org/10.1101/2020.02.05.936369
64
Automated sequence design of 2D wireframe DNA origami with honeycomb edges
Hyungmin Jun, Xiao Wang, William P. Bricker & Mark Bathe
Nature Communications, 10: 5419 (2019)
63
Multiplexed and high-throughput neuronal fluorescence imaging with diffusible probes.
Guo, S-M., Veneziano, R., Gordonov, S., Li, L., Danielson, E., Perez de Arce, K., Park, D., Kulesa, A.B., Wamhoff, E-C., Blainey, P.C., Boyden, E.S., Cottrell, J.R., Bathe, M.
Nature Communications, 10: 4377 (2019)
57
Roadmap on biological pathways for electronic nanofabrication and materials.
Bathe, M., Chrisey, L.A., Herr, D.J., Lin, Q., Rasic, D., Woolley, A.T., Zadegan, R., Zhirnov, V.V.
Nano Futures, 3: 012001 (2019)
54
Multiplexed imaging of neuronal synapses using nucleic acid probe exchange.
Bathe, M., Guo, S-M., Li, L., Veneziano, R., Gordonov, S., Cottrell, J.C.
Protocol Exchange, doi:10.1038/protex.2018.066 (2018)
52
DNA Nanotechnology: A foundation for programmable nanoscale materials.
Bathe, M. and Rothemund, P.
MRS Bulletin, 42: 882 (2017)
51
Programmed coherent coupling in a synthetic DNA-based excitonic circuit.
Boulais, E., Sawaya, N., Veneziano, R., Andreoni, A., Banal, J.L., Kondo, T., Mandal, S., Lin, S., Schlau-Cohen, G.S., Woodbury, N., Yan, H., Aspuru-Guzik, A., Bathe, M.
Nature Materials, 17: 159 (2018)
35
An isotropic acto-myosin network promotes organization of the apical cell cortex in epithelial cells.
Klingner, C., Cherian, A.V., Diesinger, P.M., Aufschnaiter, R., Maghelli, N., Keil, T., Beck, G., Tolic-Norrelykke, I., Bathe, M., and Wedlich-Soldner, R.
The Journal of Cell Biology, 207: 107 (2014)
29
H2A.Z acidic patch couples chromatin dynamics to regulation of developmental gene expression programs during lineage commitment.
Subramanian, V., Mazumder, A., Surface, L.E., Butty, V., Fields, P.A., Alwan, A., Torrey, L., Thai, K.K., Levine, S., Bathe, M., Boyer, L.
PLoS Genetics, 9: e1003725 (2013)
24
The kinetochore-bound Ska1 complex tracks depolymerizing microtubules by binding to curved protofilaments.
Schmidt, J.C., Arthanari, H., Boeszoermenyi, A., Dashkevich, N.M., Wilson-Kubalek, E., Monnier, N., Markus, M., Oberer, M., Milligan, R., Bathe, M., Wagner, G., Grishchuk, E.L., Cheeseman, I.M.
Developmental Cell, 23: 968 (2012)